PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_02138
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 232aa    MW: 26150.6 Da    PI: 6.5492
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_02138genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.97.9e-2192142256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                 +++GVr+++ +g+W+AeIrd    +++kr++lg+f+taeeAa+a++ a++ ++ge
  PEQU_02138  92 RFRGVRRRP-WGKWAAEIRDS---NIKKRIWLGTFDTAEEAAAAYDSAALIIKGE 142
                 69*******.**********4...356**********************988875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103223.10392149IPR001471AP2/ERF domain
PfamPF008471.7E-1492139IPR001471AP2/ERF domain
SMARTSM003805.2E-3592155IPR001471AP2/ERF domain
CDDcd000181.45E-1992150No hitNo description
SuperFamilySSF541714.18E-2292150IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.2E-3092149IPR001471AP2/ERF domain
PRINTSPR003671.9E-1193104IPR001471AP2/ERF domain
PRINTSPR003671.9E-11115131IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MPVNFSEHIS TTKKKTMSAG KPKRIERRLV RIIFTDADAT DSSSSDEESV NPIPRRAKKQ  60
VYEIAFQATP ESPQANRPVK AASLPENIHS NRFRGVRRRP WGKWAAEIRD SNIKKRIWLG  120
TFDTAEEAAA AYDSAALIIK GEKAVTNFPA WKDPLERIFV EASRPVSSPT SVLRCGDEQT  180
PLDGFCYGDV DVFGVSVDPP LFMTEFCMPK RQYWEVDLGD FNAEDFSMEV IT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A7e-1893149360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A8e-1893149663ATERF1
3gcc_A8e-1893149663ATERF1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008810850.12e-71PREDICTED: pathogenesis-related genes transcriptional activator PTI6-like
STRINGGSMUA_Achr7P21980_0016e-49(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15640615
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.13e-17cytokinin response factor 4